THe answers to your questions:
1.yes
2. yes, but why ? Can't see a situation to use the front locker without the rear on too, and then A-trac is moot.
3.Depends. Early release FJCs (3/06-12/06 or so) have to be modified to keep A-trac on with the rear locker engaged (see "A-Trac Hack threads from long ago). Starting with the TRD FJC, they were wired to allow A-trac to remain engaged with the rear locker on.
hope that helps...:rocker: